Données
Référentiels
Outils
Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
Description :
Seawater was filtered from different depths to retain small and large cell sizes (Protists Organisms). The DNA was extracted and amplified by PCR.
Link GBIF portal : https://www.gbif.org/dataset/d596fccb-2319-42eb-b13b-986c932780ad
Project :
Title : Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
Abstract :
Funding :
Contact : ()
Le jeu de données diffusé est issu d'un traitement automatique appliqué sur les données issues du GBIF. Les règles de l'INPN et plus globalement du SINP (en termes de périmètre et de contrôle sur les données) peuvent impliquer que l'ensemble des données du jeu source ne soit pas restitué dans le SINP.
The disseminated dataset stems from an automatic treatment applied to data coming from GBIF. INPN rules, and more generally SINP rules (in terms of perimeter and data quality controls) may imply that the whole of the source dataset might not be provided on the SINP platform.
Contacts
Type
Organisme
Nom
Fournisseur
The French National Sequencing Center (Genoscope)
Producteur
The French National Sequencing Center (Genoscope)
Dates publication :
Premiere diffusion : 24/09/2019
Dernière mise à jour : 30/11/2023
Liste des espèces répertoriées :
Filtrer par Règne
Archaea
Bacteria
Chromista
Fungi
Plantae
Protozoa
Filtrer par Classe
Halobacteria
Nitrososphaeria
Alphaproteobacteria
Bacilli
Balneolia
Betaproteobacteria
Clostridia
Cyanophyceae
Cytophagia
Deltaproteobacteria
Epsilonproteobacteria
Flavobacteria
Fusobacteriia
Gammaproteobacteria
Holophagae
Oligoflexia
Opitutae
Phycisphaerae
Planctomycetacia
Saprospiria
Spirochaetes(Class)
Verrucomicrobiae
Aconoidasida
Bacillariophyceae
Bicoecea
Chlorarachnea
Chrysophyceae
Conoidasida
Cryptophyceae
Dictyochophyceae
Dinophyceae
Globothalamea
Goniomonadophyceae
Granofilosea
Gregarinomorpha
Heterotrichea
Imbricatea
Karyorelictea
Katablepharidophyceae
Kinetofragminophora
Labyrinthulea
Litostomatea
Nassophorea
Oligohymenophorea
Oligotrichea
Pavlovophyceae
Pelagophyceae
Perkinsea
Peronosporea
Phaeophyceae
Phyllopharyngea
Phytomyxea
Prostomatea
Prymnesiophyceae
Raphidophyceae
Spirotrichea
Synurophyceae
Thecofilosea
Tubothalamea
Agaricomycetes
Agaricostilbomycetes
Chytridiomycetes
Dothideomycetes
Entomophthoromycetes
Eurotiomycetes
Glomeromycetes
Harpellomycetes
Lecanoromycetes
Leotiomycetes
Malasseziomycetes
Mixiomycetes
Mucoromycetes
Pezizomycetes
Saccharomycetes
Sordariomycetes
Taphrinomycetes
Bangiophyceae
Chlorodendrophyceae
Chlorophyceae
Compsopogonophyceae
Cyanidiophyceae
Equisetopsida
Florideophyceae
Glaucophyceae
Mamiellophyceae
Nephroselmidophyceae
Porphyridiophyceae
Pyramimonadophyceae
Rhodellophyceae
Stylonematophyceae
Trebouxiophyceae
Ulvophyceae
Choanoflagellatea
Discosea
Euglenoidea
Glissodiscea
Heterolobosea
Jakobea
Kinetoplastea
Myxomycetes
Picomonadea
Tubulinea
Filtrer par Ordre
Armophorida
Bacteroidales
Boletales
Ceratobasidiales
Corticiales
Cystofilobasidiales
Exobasidiales
Gemmatales
Lentisphaerales
Polyporales
Pucciniales
Sebacinales
Tremellales
Tricholomatales
Tulasnellales
Uredinales
Urocystales
Ustilaginales
Haemospororida
Piroplasmorida
Agaricales
Cantharellales
Agaricostilbales
Caulobacterales
Hyphomicrobiales
Kiloniellales
Kordiimonadales
Magnetococcales
Parvularculales
Rhizobiales
Rhodobacterales
Rhodospirillales
Rickettsiales
Sneathiellales
Sphingomonadales
Achnanthales
Aulacoseirales
Bacillariales
Biddulphiales
Chaetocerotanae incertae sedis
Climacospheniales
Corethrales
Coscinodiscales
Cymatosirales
Cymbellales
Eunotiales
Fragilariales
Hemiaulales
Leptocylindrales
Licmophorales
Lithodesmiales
Lyrellales
Melosirales
Naviculales
Protoraphidales
Rhabdonematales
Rhaponeidales
Rhizosoleniales
Striatellales
Surirellales
Thalassionematales
Thalassiophysales
Thalassiosirales
Triceratiales
Bacillales
Lactobacillales
Balneolales
Bangiales
Burkholderiales
Neisseriales
Anoecida
Bicoecida
Chlorachniida
Chlorodendrales
Chaetopeltidales
Chlamydomonadales
Sphaeropleales
Volvocales
Acanthoecida
Craspedida
Chromulinales
Chytridiales
Clostridiales
Compsopogonales
Erythropeltidales
Eucoccidiorida
Cryptomonadales
Pyrenomonadales
Cyanidiales
Oscillatoriales
Synechococcales
Cytophagales
Desulfarculales
Desulfobacterales
Desulfovibrionales
Desulfuromonadales
Myxococcales
Syntrophobacterales
Dictyochales
Pedinellales
Pinguiochrysidales
Blastodiniales
Coccidiniales
Dinophyceae incertae sedis
Dinophysiales
Gonyaulacales
Gymnodiniales
Noctilucales
Oxyrrhinales
Peridiniales
Prorocentrales
Pyrocystales
Suessiales
Syndiniales
Tovelliales
Centramoebida
Dactylopodida
Vannellida
Dothideales
Pleosporales
Entomophthorales
Campylobacterales
Gentianales
Malpighiales
Poales
Solanales
Euglenida
Eutreptiida
Chaetothyriales
Onygenales
Flavobacteriales
Acrochaetiales
Ahnfeltiales
Bonnemaisoniales
Ceramiales
Corallinales
Gelidiales
Gigartinales
Gracilariales
Halymeniales
Hapalidiales
Hildenbrandiales
Nemaliales
Nemastomatales
Peyssonneliales
Rhodymeniales
Sporolithales
Thoreales
Fusobacteriales
Acidithiobacillales
Aeromonadales
Alteromonadales
Arenicellales
Cellvibrionales
Chromatiales
Enterobacterales
Enterobacteriales
Immundisolibacterales
Legionellales
Methylococcales
Nevskiales
Oceanospirillales
Pasteurellales
Pseudomonadales
Thiotrichales
Vibrionales
Xanthomonadales
Glaucocystales
Ancyromonadida
Lituolida
Rotaliida
Glomerales
Goniomonadales
Desmothoracida
Leucodictyida
Archigregarinorida
Eugregarinida
Halobacteriales
Harpellales
Schizopyrenida
Heterotrichida
Acanthopleuribacterales
Euglyphida
Marimonadida
Jakobida
Protostomatida
Katablephariales
Apostomatida
Pleurostomatida
Eubodonida
Parabodonida
Trypanosomatida
Labyrinthulida
Thraustochytrida
Umbilicariales
Helotiales
Rhytismatales
Cyclotrichiida
Haptorida
Malasseziales
Mamiellales
Mixiales
Mucorales
Physarales
Stemonitales
Microthoracida
Nephroselmidales
Nitrosopumilales
Bdellovibrionales
Oligoflexales
Mobilida
Peniculida
Peritrichida
Philasterida
Pleuronematida
Sessilida
Choreotrichida
Oligotrichida
Puniceicoccales
Pavlovales
Pelagomonadales
Sarcinochrysidales
Perkinsida
Peronosporales
Saprolegniales
Pezizales
Dictyotales
Ectocarpales
Ishigeales
Laminariales
Sphacelariales
Phycisphaerales
Chlamydodontida
Dysteriida
Endogenida
Exogemmida
Exogenida
Plasmodiophorida
Picomonadida
Planctomycetales
Porphyridiales
Prorodontida
Isochrysidales
Phaeocystales
Prymnesiales
Syracosphaerales
Palmophyllales
Pyramimonadales
Chattonellales
Dixoniellales
Saccharomycetales
Saprospirales
Hypocreales
Microascales
Xylariales
Spirochaetales
Euplotida
Kiitrichida
Licnophorida
Protocruziida
Stylonematales
Synurales
Taphrinales
Phaeodendrida
Phaeosphaerida
Chlorellales
Oocystales
Prasiolales
Trebouxiales
Miliolida
Euamoebida
Leptomyxida
Bryopsidales
Cladophorales
Oltmannsiellopsidales
Siphonocladales
Trentepohliales
Ulvales
Verrucomicrobiales
Filtrer par Famille
Amphisiellidae
Arthopyreniaceae
Corallochytriidae
Dermocystidae
Epiclintidae
Glomerellaceae
Holostichidae
Oxytrichidae
Plectosphaerellaceae
Pseudokeronopsidae
Reophacidae
Trachelostylidae
Urostylidae
Acanthoecidae
Stephanoecidae
Acanthopleuribacteraceae
Achnanthidiaceae
Cocconeidaceae
Acidithiobacillaceae
Acrochaetiaceae
Aeromonadaceae
Omphalotaceae
Agaricostilbaceae
Chionosphaeraceae
Ahnfeltiaceae
Alteromonadaceae
Colwelliaceae
Idiomarinaceae
Pseudoalteromonadaceae
Shewanellaceae
Ancyromonadidae
Caecitellidae
Foettingeriidae
Pseudocolliniidae
Selenidiidae
Arenicellaceae
Metopidae
Aulacoseiraceae
Bacillaceae
Bacillariaceae
Prolixibacteraceae
Balneolaceae
Bangiaceae
Bdellovibrionaceae
Bicosoecaceae
Cafeteriaceae
Biddulphiaceae
Blastodinidae
Paradinophycidae
Sclerodermataceae
Bonnemaisoniaceae
Naccariaceae
Halimedaceae
Burkholderiaceae
Comamonadaceae
Campylobacteraceae
Helicobacteraceae
Clavulinaceae
Hyphomonadaceae
Maricaulaceae
Cellvibrionaceae
Halieaceae
Spongiibacteraceae
Acanthamoebidae
Callithamniaceae
Ceramiaceae
Dasyaceae
Delesseriaceae
Rhodomelaceae
Wrangeliaceae
Ceratobasidiaceae
Attheyaceae
Chaetocerotaceae
Chaetopeltidaceae
Herpotrichiellaceae
Chattonellaceae
Chlamydodontidae
Lynchellidae
Chlorococcaceae
Coccomyxaceae
Scotiellocystoidaceae
Chlorarachniaceae
Chlorellaceae
Chlorodendraceae
Codonellidae
Codonellopsidae
Cyttarocylididae
Lynnellidae
Metacylididae
Ptychocylididae
Rhabdonellidae
Strobilidiidae
Strombidinopsidae
Tintinnidae
Xystonellidae
Chromatiaceae
Ectothiorhodospiraceae
Thioalkalispiraceae
Wenzhouxiangellaceae
Woeseiaceae
Chromulinaceae
Dinobryaceae
Paraphysomonadaceae
Chytridiaceae
Chytriomycetaceae
Cladophoraceae
Pithophoraceae
Climacospheniaceae
Clostridiaceae
Chytriodiniaceae
Compsopogonaceae
Corallinaceae
Lithophyllaceae
Lithothamniaceae
Corethraceae
Corticiaceae
Coscinodiscaceae
Hemidiscaceae
Salpingoecidae
Cryptomonadaceae
Hemiselmidaceae
Cyanidiaceae
Galdieriaceae
Mesodiniidae
Cymatosiraceae
Cymbellaceae
Gomphonemataceae
Cystofilobasidiaceae
Reichenbachiellaceae
Vexilliferidae
Clathrulinidae
Desulfarculaceae
Desulfobacteraceae
Desulfobulbaceae
Nitrospinaceae
Desulfohalobiaceae
Desulfovibrionaceae
Desulfuromonadaceae
Geobacteraceae
Dictyochaceae
Dictyotaceae
Amphidomataceae
Dinophysaceae
Dinophysiaceae
Dixoniellaceae
Saccotheciaceae
Dysteriidae
Hartmannulidae
Plesiotrichopidae
Chordariaceae
Ectocarpaceae
Scytosiphonaceae
Acinetidae
Erwiniaceae
Yersiniaceae
Enterobacteriaceae
Ancylistaceae
Entomophthoraceae
Erythrotrichiaceae
Hartmannellidae
Bodonaceae
Adeleidae
Aggregatidae
Cryptosporidiidae
Eimeriidae
Sarcocystidae
Euglenaceae
Phacaceae
Trinematidae
Gregarinidae
Lecudinidae
Urosporidae
Eunotiaceae
Aspidiscidae
Discocephalidae
Euplotidae
Gastrocirrhidae
Uronychiidae
Astasiaceae
Exobasidiaceae
Chilodochonidae
Ephelotidae
Paracinetidae
Cryomorphaceae
Flavobacteriaceae
Fragilariaceae
Fusobacteriaceae
Gelidiaceae
Gemmataceae
Apocynaceae
Cruoriaceae
Dumontiaceae
Gigartinaceae
Gloiosiphoniaceae
Glaucocystaceae
Glomeraceae
Goniomonadaceae
Ceratiaceae
Ceratocoryaceae
Goniodomataceae
Gonyaulacaceae
Ostreopsidaceae
Pyrophacaceae
Gracilariaceae
Gymnodiniaceae
Kareniaceae
Polykrikaceae
Ptychodiscaceae
Warnowiaceae
Plasmodiidae
Halobacteriaceae
Halymeniaceae
Hapalidiaceae
Didiniidae
Helicoprorodontidae
Lacrymariidae
Spathidiidae
Legeriomycetaceae
Sclerotiniaceae
Hemiaulaceae
Condylostomatidae
Folliculinidae
Maristentoridae
Peritromidae
Hildenbrandiaceae
Cohaesibacteraceae
Kaistiaceae
Parvibaculaceae
Rhizobiaceae
Xanthobacteraceae
Hypocreaceae
Immundisolibacteraceae
Ishigeaceae
Isochrysidaceae
Noelaerhabdaceae
Jakobidae
Katablepharidaceae
Kiitrichidae
Kiloniellaceae
Kordiimonadaceae
Labyrinthulaceae
Streptococcaceae
Laminariaceae
Lessoniaceae
Coxiellaceae
Legionellaceae
Lentisphaeraceae
Leptocylindraceae
Flabellulidae
Leucodictyidae
Massisteriidae
Licmophoraceae
Licnophoridae
Lithodesmiaceae
Trochamminidae
Lyrellaceae
Magnetococcaceae
Malasseziaceae
Salicaceae
Bathycoccaceae
Mamiellaceae
Marimonadida incertae sedis
Stephanopyxidaceae
Methylococcaceae
Ceratocystidaceae
Discotrichidae
Soritidae
Mixiaceae
Trichodinidae
Cunninghamellaceae
Lichtheimiaceae
Mucoraceae
Rhizopodaceae
Nannocystaceae
Diadesmidaceae
Naviculaceae
Phaeodactylaceae
Pleurosigmataceae
Sellaphoraceae
Chromobacteriaceae
Neisseriaceae
Liagoraceae
Nemastomataceae
Nephroselmidaceae
Algiphilaceae
Salinisphaeraceae
Nitrosopumilaceae
Kofoidiniaceae
Noctilucaceae
Alcanivoracaceae
Endozoicomonadaceae
Hahellaceae
Halomonadaceae
Litoricolaceae
Oceanospirillaceae
Oleiphilaceae
Saccharospirillaceae
Pseudobacteriovoracaceae
Strombidiidae
Tontoniidae
Oltmannsiellopsidaceae
Onygenaceae
Oocystaceae
Oscillatoriaceae
Oxyrrhinaceae
Palmophyllaceae
Bodonidae
Parvularculaceae
Pasteurellaceae
Pavlovaceae
Pedinellaceae
Pelagomonadaceae
Frontoniidae
Lembadionidae
Parameciidae
Glenodiniaceae
Heterocapsaceae
Oxytoxaceae
Peridiniaceae
Pfiesteriaceae
Protoperidiniaceae
Opisthonectidae
Urceolariidae
Perkinsidae
Peronosporaceae
Peyssonneliaceae
Helvellaceae
Phaeocystaceae
Coelodendridae
Aulosphaeridae
Cinetochilidae
Loxocephalidae
Orchitophryidae
Parauronematidae
Philasteridae
Pseudocohnilembidae
Uronematidae
Phycisphaeraceae
Didymiaceae
Picomonadidae
Pinguiochrysidaceae
Haemohormidiidae
Planctomycetaceae
Plasmodiophoridae
Didymellaceae
Leptosphaeriaceae
Phaeosphaeriaceae
Pleosporaceae
Venturiaceae
Cyclidiidae
Pleuronematidae
Amphileptidae
Litonotidae
Poaceae
Meruliaceae
Phanerochaetaceae
Polyporaceae
Porphyridiaceae
Prasiolaceae
Prorocentraceae
Colepidae
Holophryidae
Placidae
Protocruziidae
Protoraphidaceae
Trachelocercidae
Chrysochromulinaceae
Prymnesiaceae
Moraxellaceae
Pseudomonadaceae
Pucciniaceae
Puniceicoccaceae
Pyramimonadaceae
Chroomonadaceae
Geminigeraceae
Pyrenomonadaceae
Pyrocystaceae
Rhabdonemataceae
Rhaphoneidaceae
Aurantimonadaceae
Bradyrhizobiaceae
Hyphomicrobiaceae
Methylobacteriaceae
Methylocystaceae
Phyllobacteriaceae
Rhodobiaceae
Rhizosoleniaceae
Rhodobacteraceae
Acetobacteraceae
Geminicoccaceae
Rhodospirillaceae
Champiaceae
Lomentariaceae
Rhodymeniaceae
Rhytismataceae
Anaplasmataceae
Ehrlichiaceae
Rickettsiaceae
Anomalinidae
Bolivinitidae
Buliminidae
Calcarinidae
Candeinidae
Cibicididae
Globigerinidae
Globorotaliidae
Hastigerinidae
Nonionidae
Nummulitidae
Pseudoparrellidae
Pulleniatinidae
Rotaliidae
Metschnikowiaceae
Haliphthoraceae
Saprospiraceae
Sarcinochrysidaceae
Vahlkampfiidae
Sebacinaceae
Vorticellidae
Zoothamniidae
Boodleaceae
Siphonocladaceae
Sneathiellaceae
Solanaceae
Sphacelariaceae
Scenedesmaceae
Erythrobacteraceae
Sphingomonadaceae
Spirochaetaceae
Sporolithaceae
Stemonitidaceae
Striatellaceae
Stylonemataceae
Suessiaceae
Symbiodiniaceae
Auriculaceae
Entomoneidaceae
Surirellaceae
Syndiniaceae
Leptolyngbyaceae
Syntrophaceae
Mallomonadaceae
Syracosphaeraceae
Taphrinaceae
Thalassionemataceae
Catenulaceae
Skeletonemaceae
Stephanodiscaceae
Thalassiosiraceae
Piscirickettsiaceae
Thiotrichaceae
Thoreaceae
Aplanochytriidae
Thraustochytriaceae
Tovelliaceae
Botryococcaceae
Trichosporonaceae
Trentepohliaceae
Triceratiaceae
Hygrophoraceae
Marasmiaceae
Pleurotaceae
Trypanosomatidae
Tulasnellaceae
Kornmanniaceae
Phaeophilaceae
Ulvaceae
Ulvellaceae
Umbilicariaceae
Melampsoraceae
Melanotaeniaceae
Ustilaginaceae
Vannellidae
Verrucomicrobiaceae
Vibrionaceae
Chlamydomonadaceae
Dunaliellaceae
Xanthomonadaceae
Xylariaceae
Nom scientifique
CD_NOM
Règne
Classe
Ordre
Famille
Date première observation
Date dernière observation
Fiche
Chiffres clés :
28195 données
172 espèces
172 taxons
Répartition des données par groupes taxonomiques :
Groupes vernaculaires de premier ordre
Groupes vernaculaires de second ordre
Répartition temporelle: